BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H04SP1|AL426597
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1765 1626 0.0
>3x_Contig1765
Length = 24733
Score = 1626 bits (814), Expect = 0.0
Identities = 845/860 (98%), Gaps = 2/860 (0%)
Strand = Plus / Minus
Query: 1 gatcttcaggtagatattgtctagtgttcataggaactgccatgttgatgaaaaahtcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11708 gatcttcaggtagatattgtctagtgttcataggaactgccatgttgatgaaaaattcgt 11649
Query: 61 tccattttctatcgtcaaacaacccagcttcatagcaactaacaaaccagcacgcttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11648 tccattttctatcgtcaaacaacccagcttcatagcaactaacaaaccagcacgcttgca 11589
Query: 121 tgaagggcgttaacgtagctttaccattcaacttgtccttcactctagctctcatcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11588 tgaagggcgttaacgtagctttaccattcaacttgtccttcactctagctctcatcttct 11529
Query: 181 gcatacctgttgggtcaatcttgataatgtgagccatgtgactagcgggtgacgcatcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11528 gcatacctgttgggtcaatcttgataatgtgagccatgtgactagcgggtgacgcatcga 11469
Query: 241 taggacgagtgatgggttggtcccatttcttggtcaacaatttctttcccatttgactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11468 taggacgagtgatgggttggtcccatttcttggtcaacaatttctttcccatttgactca 11409
Query: 301 agaggaaagatgcaataaacgatggattgacaccataagawactttttcttcgattgggt 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11408 agaggaaagatgcaataaacgatggattgacaccataagatactttttcttcgattgggt 11349
Query: 361 ctggtaacttcggcaattgctcgtagtctcttccataatgtaaaaratactctaactgtt 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 11348 ctggtaacttcggcaattgctcgtagtctcttccataatgtaaaagatactctaactgtt 11289
Query: 421 gcaaatwggttccagaaaatwtacccaattcgatcgawaagtcttccaataaatwagctc 480
|||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||||
Sbjct: 11288 gcaaattggttccagaaaatttacccaattcgatcgataagtcttccaataaattagctc 11229
Query: 481 cggaagtaccatcacttgtaacatggttcgtgatgtaaagaatatccttgaatcccctcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11228 cggaagtaccatcacttgtaacatggttcgtgatgtaaagaatatccttgaatcccctcg 11169
Query: 541 ctcccttcttatcatctgccgaa-gananagcaccaatctgaaatggggtttcgttggat 599
||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 11168 ctcccttcttatcatctgccgaaggcaaaagcaccaatctgaaatggggtttcgttggat 11109
Query: 600 cccaacatgaaaaagtgtactgactgacgaccacggacaaatcatctccgtatttgaacc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11108 cccaacatgaaaaagtgtactgactgacgaccacggacaaatcatctccgtatttgaacc 11049
Query: 660 catcatgttcccattgattcaaaatctcgttataaaatttggaatgttcaggttgcttgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11048 catcatgttcccattgattcaaaatctcgttataaaatttggaatgttcaggttgcttgt 10989
Query: 720 tcatgatcacatcttcamgcttcaattgatctactacactaacgtaatcctctgcaagtc 779
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10988 tcatgatcacatcttcaagcttcaattgatctactacactaacgtaatcctctgcaagtc 10929
Query: 780 ccggtttattgtaaaawgcttcactggtataatacgtctcctttttcgttccmatactct 839
|||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 10928 ccggtttattgtaaaatgcttcactggtataatacgtct-ctttttcgttccaatactct 10870
Query: 840 ggaatgatagtcgtagcaag 859
||||||||||||||||||||
Sbjct: 10869 ggaatgatagtcgtagcaag 10850
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5240
Number of Sequences: 1807
Number of extensions: 5240
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)